Cunha RL, Nicastro KR, Zardi GI, et al. Comparative mitogenomic analyses and gene rearrangements reject the alleged polyphyly of a bivalve genus. PeerJ. 2022;10:e13953. doi:10:e13953 https://doi.org/10.7717/peerj.13953

Almeida SC, Neiva J, Sousa F, et al. A low‐latitude species pump: Peripheral isolation, parapatric speciation and mating‐system evolution converge in a marine radiationAbstract. Molecular Ecology. 2022;31(18):4797 - 4817. doi:10.1111/mec.v31.1810.1111/mec.16623

Pes K, Friese A, Cox CJ, Laizé V, Fernández I. Biochemical and molecular responses of the Mediterranean mussel (Mytilus galloprovincialis) to short-term exposure to three commonly prescribed drugs. Marine Environmental Research. 2021;168:105309. doi:10.1016/j.marenvres.2021.105309

Sousa F, Civán P, Foster PG, Cox CJ. The Chloroplast Land Plant Phylogeny: Analyses Employing Better-Fitting Tree- and Site-Heterogeneous Composition ModelsDataSheet_1.pdfDataSheet_2.pdf. Frontiers in Plant Science. 2020;11. doi:10.3389/fpls.2020.0106210.3389/fpls.2020.01062.s00110.3389/fpls.2020.01062.s002

Sousa F, Civán P, Brazão J, Foster PG, Cox CJ. The mitochondrial phylogeny of land plants shows support for Setaphyta under composition-heterogeneous substitution models,. PeerJ. 2020;8:e8995. doi:10.7717/peerj.899510.7717/peerj.8995/fig-110.7717/peerj.8995/fig-210.7717/peerj.8995/table-110.7717/peerj.8995/supp-110.7717/peerj.8995/supp-210.7717/peerj.8995/supp-310.7717/peerj.8995/supp-4

Carlier JD, Ettamimi S, Cox CJ, Hammani K, Ghazal H, Costa MClara. Prokaryotic diversity in stream sediments affected by acid mine drainage. Extremophiles. 2020. doi:10.1007/s00792-020-01196-8

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Egger C, Neusser TP, Norenburg J, et al. Uncovering the shell game with barcodes: diversity of meiofaunal Caecidae snails (Truncatelloidea, Caenogastropoda) from Central America. ZooKeys. 2020;968:1 - 42. doi:10.3897/zookeys.968.52986

Fernández I, Fernandes JMO, Roberto VP, et al. Circulating small non-coding RNAs provide new insights into vitamin K nutrition and reproductive physiology in teleost fish. Biochimica et Biophysica Acta (BBA) - General Subjects. 2019;1863(1):39-51. doi:10.1016/j.bbagen.2018.09.017

Karimi E, Keller-Costa T, Slaby BM, et al. Genomic blueprints of sponge-prokaryote symbiosis are shared by low abundant and cultivatable Alphaproteobacteria. Scientific reports. 2019;9:1999.

Louro B, De Moro G, Garcia C, et al. A haplotype-resolved draft genome of the European sardine (Sardina pilchardus). GigaScience. 2019;8. doi:10.1093/gigascience/giz059

de Sousa CBruno, Cox CJ, Brito L, et al. Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences. PloS one. 2019;14:e0210143.

Ettamimi S, Carlier JD, Cox CJ, et al. A meta-taxonomic investigation of the prokaryotic diversity of water bodies impacted by acid mine drainage from the São Domingos mine in southern Portugal. Extremophiles. 2019. doi:10.1007/s00792-019-01136-1

Sousa F, Foster PG, Donoghue PCJ, Schneider H, Cox CJ. Nuclear protein phylogenies support the monophyly of the three bryophyte groups (Bryophyta Schimp.). New Phytologist. 2019;222(1):565 - 575. doi:10.1111/nph.2019.222.issue-110.1111/nph.15587

Williams TA, Cox CJ, Foster PG, Szöllősi GJ, T. Embley M. Phylogenomics provides robust support for a two-domains tree of life. Nature Ecology & Evolution. 2019. doi:10.1038/s41559-019-1040-x

Liu Y, Johnson MG, Cox CJ, et al. Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes. Nature communications. 2019;10:1485.

Rosa J, Cox CJ, M. Cancela L, Laizé V. Identification of a fish short-chain dehydrogenase/reductase associated with bone metabolism. Gene. 2018;645:137 - 145. doi:10.1016/j.gene.2017.12.021

Puttick MN, Morris JL, Williams TA, et al. The Interrelationships of Land Plants and the Nature of the Ancestral Embryophyte. Current Biology. 2018;28(5):733 - 745.e2. doi:10.1016/j.cub.2018.01.063

Cox CJ. Land Plant Molecular Phylogenetics: A Review with Comments on Evaluating Incongruence Among Phylogenies. Critical Reviews in Plant Sciences. 2018;37(2-3):113 - 127. doi:10.1080/07352689.2018.1482443